Zoterro on Zenodo- a popular science site,

[Mike Marchywka]

I was curious to see how this excellent masterpiece was
doing,

https://zenodo.org/records/10038912

and seeing it only had 2 views, I was curious about
why. It turns out the title was wrong so I corrected
it and checked with Zoterro and TooBib.

Zoterro webform appears to be html scraped,

@article{noauthor_brain_nodate,
	title = {Brain {Microbiome} : {Make} {Your} {Garden} {Grow}?'},
	shorttitle = {Brain {Microbiome}},
	url = {https://zenodo.org/records/10038912},
	doi = {10.5281/zenodo.10038912},
	abstract = {Analysis of differential abundances in AD and control brain differing from authors who originally published the data.},
	language = {en},
	urldate = {2023-10-29},
}

Toobib, which did need to be fixed for the date handling to extract
the year, returns the info from datacite. Originally I was going
to point out the title had not been corrected in the DOI
but was ok in the Zoterro output but by the time I fixed the
date issue the datacite info was updated, I would post this
on their forum but not one of my posts made it through :) 
 
toobib -clip
mjm>clip xxxx
./toobib.h588  cmd=clip p1=xxxx p2= flags=18 x.flag_to_string(flags,0)=show_trial paste_citation 
./mjm_med2bib_guesses.h997  uin=https://zenodo.org/records/10038912 dest=xxxx flags=18
./mjm_med2bib_guesses.h1171 % mjmhandler: toobib handledoi(datacite)
% date 2023-10-29:16:33:12 Sun 29 Oct 2023 04:33:12 PM EDT
% srcurl: https://zenodo.org/records/10038912
% citeurl: https://api.datacite.org/dois/10.5281/zenodo.10038912
@article{marchywka_Brain_Microbiome_Make_Your_2023,
X_TooBib = {date: 2023-10-25},
X_TooBib = {urldate: FixBeKvp s= cmd=date "+%Y-%m-%d" d=2023-10-29 dn=urldate},
X_TooBib = {year: ReWriteParse be.get("year")=},
X_TooBib = {author: ReWriteParse be.get("author")=},
X_TooBib = {journal: ReWriteParse be.get(s)=Zenodo be.get(dest)=},
X_TooBib = {author: marchywka , mike},
alternateidentifier = {oai:zenodo.org:10038912},
alternateidentifiertype = {oai},
author = {marchywka , mike},
author_orig = {marchywka, mike},
authors = {marchywka, mike},
bibtex = {article},
citationcount = {0},
citeproc = {article-journal},
contenturl = {},
created = {2023-10-25T01:10:09.000Z},
date = {2023-10-25},
date_orig = {2023-10-25 and 2023-10-25           },
dateinformation = {draft},
datetype = {Issued and Available},
description = {Analysis of differential abundances in AD and control brain differing from authors who originally published the data. \NBSP},
description_as_rcvd = {Analysis of differential abundances in AD and control brain differing from authors who originally published the data. �},
descriptiontype = {Abstract},
doi = {10.5281/zenodo.10038912},
downloadcount = {0},
identifier = {oai:zenodo.org:10038912},
identifiertype = {oai},
isactive = {true},
journal = {Zenodo},
language = {},
metadataversion = {1},
partcount = {0},
partofcount = {0},
prefix = {10.5281},
publicationyear = {2023},
published = {2023},
publisher = {Zenodo},
reason = {},
referencecount = {0},
registered = {2023-10-25T01:10:10.000Z},
relatedidentifier = {10.5281/zenodo.10038911},
relatedidentifiertype = {DOI},
relationtype = {IsVersionOf},
resourcetype = {Working paper},
resourcetypegeneral = {Text},
rights = {Creative Commons Attribution 4.0 International and MIT License},
rightsidentifier = {cc-by-4.0 and mit},
rightsidentifierscheme = {SPDX and SPDX},
rightsuri = {https://creativecommons.org/licenses/by/4.0/legalcode and https://opensource.org/licenses/MIT},
ris = {RPRT},
schemaorg = {ScholarlyArticle},
schemaversion = {http://datacite.org/schema/kernel-4},
schemeuri = {https://spdx.org/licenses/ and https://spdx.org/licenses/},
source = {api},
state = {findable},
suffix = {zenodo.10038912},
title = {Brain Microbiome : Make Your Garden Grow?'},
updated = {2023-10-29T17:52:28.000Z},
url = {https://zenodo.org/doi/10.5281/zenodo.10038912},
urldate = {2023-10-29},
version = {0.3},
versioncount = {0},
versionofcount = {0},
viewcount = {0},
xml = {deleted for space},
year = {2023},
final_assembly ={ TooBib handler handledoi(datacite)},
srcurl={https://zenodo.org/records/10038912},
xsrcurl={https://zenodo.org/records/10038912},
citeurl={https://api.datacite.org/dois/10.5281/zenodo.10038912},
toobib-date={2023-10-29:16:33:12 Sun 29 Oct 2023 04:33:12 PM EDT}

}


./mjm_med2bib_guesses.h1179  saving to  df=xxxx
./mjm_med2bib_guesses.h1193  have citation   nfound=1 cite=\cite{marchywka_Brain_Microbiome_Make_Your_2023} something=1 paste_citation=1
mjm>


There are some things like not putting braces in the title etc
that zoterro has worked out that i don't really care about
but when TooBib does fail I can get a variety of bibtex-es
and it is normally easy to fix or I can just use options
to get the one that works if any. Early on I expected
to hand-merge bibtex from different sources although
it has not been a big enough problem to write the code
most of the pieces are there. Zoterro got the "language"
entry but it seems to be null in the datacite entry.

And changing the title from "rain microbiome" to "brain microbiome"
went from 2 views in last 5 days to now 10 on a Sunday ...



-- 

mike marchywka
44 Crosscreek Trail
Jasper GA 30143
USA, Earth marchywka at hotmail.com
 404-788-1216 ORCID: 0000-0001-9237-455X